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implemented the FO-MPA swarm optimization and prepared the related figures and manuscript text. HIGHLIGHTS who: Yuan Jian and Qin Xiao from the Fukuoka University, Japan have published the Article: Research and Application of Fine-Grained Image Classification Based on Small Collar Dataset, in the Journal: (JOURNAL) what: MC-Loss drills down on the channels to effectively navigate the model, focusing on different distinguishing regions and highlighting diverse features. 42, 6088 (2017). A. et al. Coronavirus Disease (COVID-19): A primer for emergency physicians (2020) Summer Chavez et al. ADS Inf. The proposed IFM approach is summarized as follows: Extracting deep features from Inception, where about 51 K features were extracted. In Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition, 19 (2015). In this paper, Inception is applied as a feature extractor, where the input image shape is (229, 229, 3). Math. Decaf: A deep convolutional activation feature for generic visual recognition. Duan et al.13 applied the Gaussian mixture model (GMM) to extract features from pulmonary nodules from CT images. International Conference on Machine Learning647655 (2014). Mirjalili, S., Mirjalili, S. M. & Lewis, A. Grey wolf optimizer. 152, 113377 (2020). Propose a novel robust optimizer called Fractional-order Marine Predators Algorithm (FO-MPA) to select efficiently the huge feature vector produced from the CNN. So, for a \(4 \times 4\) matrix, will result in \(2 \times 2\) matrix after applying max pooling. Article Google Scholar. COVID-19 Chest X -Ray Image Classification with Neural Network Furthermore, deep learning using CNN is considered one of the best choices in medical imaging applications20, especially classification. A.T.S. The largest features were selected by SMA and SGA, respectively. Knowl. Table3 shows the numerical results of the feature selection phase for both datasets. Deep cnns for microscopic image classification by exploiting transfer learning and feature concatenation. In57, ResNet-50 CNN has been applied after applying horizontal flipping, random rotation, random zooming, random lighting, and random wrapping on raw images. & Carlsson, S. Cnn features off-the-shelf: an astounding baseline for recognition. A deep feature learning model for pneumonia detection applying a combination of mRMR feature selection and machine learning models. For this motivation, we utilize the FC concept with the MPA algorithm to boost the second step of the standard version of the algorithm. Harikumar, R. & Vinoth Kumar, B. This means we can use pre-trained model weights, leveraging all of the time and data it took for training the convolutional part, and just remove the FCN layer. A survey on deep learning in medical image analysis. In this subsection, a comparison with relevant works is discussed. Then, using an enhanced version of Marine Predators Algorithm to select only relevant features. Refresh the page, check Medium 's site status, or find something interesting. Two real datasets about COVID-19 patients are studied in this paper. Also, in58 a new CNN architecture called EfficientNet was proposed, where more blocks were added on top of the model after applying normalization of images pixels intensity to the range (0 to 1). The evaluation showed that the RDFS improved SVM robustness against reconstruction kernel and slice thickness. Dhanachandra and Chanu35 proposed a hybrid method of dynamic PSO and fuzzy c-means to segment two types of medical images, MRI and synthetic images. The name "pangolin" comes from the Malay word pengguling meaning "one who rolls up" from guling or giling "to roll"; it was used for the Sunda pangolin (Manis javanica). We are hiring! The shape of the output from the Inception is (5, 5, 2048), which represents a feature vector of size 51200. 41, 923 (2019). One of the best methods of detecting. D.Y. Future Gener. Biomed. arXiv preprint arXiv:2003.11597 (2020). The model was developed using Keras library47 with Tensorflow backend48. After feature extraction, we applied FO-MPA to select the most significant features. However, the modern name is tenggiling.In Javanese it is terenggiling; and in the Philippine languages, it is goling, tanggiling, or balintong (with the same meaning).. They concluded that the hybrid method outperformed original fuzzy c-means, and it had less sensitive to noises. In Inception, there are different sizes scales convolutions (conv. In Eq. 2020-09-21 . Detecting COVID-19 in X-ray images with Keras - PyImageSearch 132, 8198 (2018). They were manually aggregated from various web based repositories into a machine learning (ML) friendly format with accompanying data loader code. The symbol \(r\in [0,1]\) represents a random number. Types of coronavirus, their symptoms, and treatment - Medical News Today The dataset consists of 21,165 chest X-ray (CXR) COVID-19 images distributed on four categories which are COVID19, lung opacity, viral pneumonia, and NORMAL (Non-COVID). FCM reinforces the ANFIS classification learning phase based on the features of COVID-19 patients. Also, other recent published works39, who combined a CNN architecture with Weighted Symmetric Uncertainty (WSU) to select optimal features for traffic classification. MRFGRO: a hybrid meta-heuristic feature selection method for screening COVID-19 using deep features, Detection and analysis of COVID-19 in medical images using deep learning techniques, Cov-caldas: A new COVID-19 chest X-Ray dataset from state of Caldas-Colombia, Deep learning in veterinary medicine, an approach based on CNN to detect pulmonary abnormalities from lateral thoracic radiographs in cats, COVID-Net: a tailored deep convolutional neural network design for detection of COVID-19 cases from chest X-ray images, ANFIS-Net for automatic detection of COVID-19, A multi-scale gated multi-head attention depthwise separable CNN model for recognizing COVID-19, Validating deep learning inference during chest X-ray classification for COVID-19 screening, Densely attention mechanism based network for COVID-19 detection in chest X-rays, https://www.who.int/emergencies/diseases/novel-coronavirus-2019/situation-reports/, https://github.com/ieee8023/covid-chestxray-dataset, https://stanfordmlgroup.github.io/projects/chexnet, https://www.kaggle.com/paultimothymooney/chest-xray-pneumonia, https://www.sirm.org/en/category/articles/covid-19-database/, https://drive.google.com/file/d/1-oK-eeEgdCMCnykH364IkAK3opmqa9Rvasx/view?usp=sharing, https://doi.org/10.1016/j.irbm.2019.10.006, https://research.googleblog.com/2017/11/automl-for-large-scaleimage.html, https://doi.org/10.1016/j.engappai.2020.103662, https://www.sirm.org/category/senza-categoria/covid-19/, https://doi.org/10.1016/j.future.2020.03.055, http://creativecommons.org/licenses/by/4.0/, Skin cancer detection using ensemble of machine learning and deep learning techniques, Plastic pollution induced by the COVID-19: Environmental challenges and outlook, An Inclusive Survey on Marine Predators Algorithm: Variants andApplications, A Multi-strategy Improved Outpost and Differential Evolution Mutation Marine Predators Algorithm for Global Optimization, A light-weight convolutional Neural Network Architecture for classification of COVID-19 chest X-Ray images. Table4 show classification accuracy of FO-MPA compared to other feature selection algorithms, where the best, mean, and STD for classification accuracy were calculated for each one, besides time consumption and the number of selected features (SF). IEEE Trans. While the second half of the agents perform the following equations. Syst. 4b, FO-MPA algorithm selected successfully fewer features than other algorithms, as it selected 130 and 86 features from Dataset 1 and Dataset 2, respectively. Acharya et al.11 applied different FS methods to classify Alzheimers disease using MRI images. \(\bigotimes\) indicates the process of element-wise multiplications. If the random solution is less than 0.2, it converted to 0 while the random solution becomes 1 when the solutions are greater than 0.2. Heidari, A. arXiv preprint arXiv:1704.04861 (2017). COVID-19 image classification using deep features and fractional-order marine predators algorithm, $$\begin{aligned} \chi ^2=\sum _{k=1}^{n} \frac{(O_k - E_k)^2}{E_k} \end{aligned}$$, $$\begin{aligned} ni_{j}=w_{j}C_{j}-w_{left(j)}C_{left(j)}-w_{right(j)}C_{right(j)} \end{aligned}$$, $$\begin{aligned} fi_{i}=\frac{\sum _{j:node \mathbf \ {j} \ splits \ on \ feature \ i}ni_{j}}{\sum _{{k}\in all \ nodes }ni_{k}} \end{aligned}$$, $$\begin{aligned} normfi_{i}=\frac{fi_{i}}{\sum _{{j}\in all \ nodes }fi_{j}} \end{aligned}$$, $$\begin{aligned} REfi_{i}=\frac{\sum _{j \in all trees} normfi_{ij}}{T} \end{aligned}$$, $$\begin{aligned} D^{\delta }(U(t))=\lim \limits _{h \rightarrow 0} \frac{1}{h^\delta } \sum _{k=0}^{\infty }(-1)^{k} \begin{pmatrix} \delta \\ k\end{pmatrix} U(t-kh), \end{aligned}$$, $$\begin{aligned} \begin{pmatrix} \delta \\ k \end{pmatrix}= \frac{\Gamma (\delta +1)}{\Gamma (k+1)\Gamma (\delta -k+1)}= \frac{\delta (\delta -1)(\delta -2)\ldots (\delta -k+1)}{k! The conference was held virtually due to the COVID-19 pandemic. The Softmax activation function is used for this purpose because the output should be binary (positive COVID-19 negative COVID-19). While55 used different CNN structures. The lowest accuracy was obtained by HGSO in both measures. Classification of Human Monkeypox Disease Using Deep Learning Models This paper reviews the recent progress of deep learning in COVID-19 images applications from five aspects; Firstly, 33 COVID-19 datasets and data enhancement methods are introduced; Secondly, COVID-19 classification methods . (8) can be remodeled as below: where \(D^1[x(t)]\) represents the difference between the two followed events. In order to normalize the values between 0 and 1 by dividing by the sum of all feature importance values, as in Eq. 11314, 113142S (International Society for Optics and Photonics, 2020). Transmission scenarios for middle east respiratory syndrome coronavirus (mers-cov) and how to tell them apart. Covid-19 dataset. \end{aligned} \end{aligned}$$, $$\begin{aligned} WF(x)=\exp ^{\left( {\frac{x}{k}}\right) ^\zeta } \end{aligned}$$, $$\begin{aligned}&Accuracy = \frac{\text {TP} + \text {TN}}{\text {TP} + \text {TN} + \text {FP} + \text {FN}} \end{aligned}$$, $$\begin{aligned}&Sensitivity = \frac{\text {TP}}{\text{ TP } + \text {FN}}\end{aligned}$$, $$\begin{aligned}&Specificity = \frac{\text {TN}}{\text {TN} + \text {FP}}\end{aligned}$$, $$\begin{aligned}&F_{Score} = 2\times \frac{\text {Specificity} \times \text {Sensitivity}}{\text {Specificity} + \text {Sensitivity}} \end{aligned}$$, $$\begin{aligned} Best_{acc} = \max _{1 \le i\le {r}} Accuracy \end{aligned}$$, $$\begin{aligned} Best_{Fit_i} = \min _{1 \le i\le r} Fit_i \end{aligned}$$, $$\begin{aligned} Max_{Fit_i} = \max _{1 \le i\le r} Fit_i \end{aligned}$$, $$\begin{aligned} \mu = \frac{1}{r} \sum _{i=1}^N Fit_i \end{aligned}$$, $$\begin{aligned} STD = \sqrt{\frac{1}{r-1}\sum _{i=1}^{r}{(Fit_i-\mu )^2}} \end{aligned}$$, https://doi.org/10.1038/s41598-020-71294-2. The two datasets consist of X-ray COVID-19 images by international Cardiothoracic radiologist, researchers and others published on Kaggle. For Dataset 2, FO-MPA showed acceptable (not the best) performance, as it achieved slightly similar results to the first and second ranked algorithm (i.e., MPA and SMA) on mean, best, max, and STD measures. Authors The COVID-19 pandemic has been having a severe and catastrophic effect on humankind and is being considered the most crucial health calamity of the century. 115, 256269 (2011). COVID-19 image classification using deep features and fractional-order Mutation: A mutation refers to a single change in a virus's genome (genetic code).Mutations happen frequently, but only sometimes change the characteristics of the virus. Improving COVID-19 CT classification of CNNs by learning parameter Article The images or other third party material in this article are included in the article's Creative Commons license, unless indicated otherwise in a credit line to the material. Liao, S. & Chung, A. C. Feature based nonrigid brain mr image registration with symmetric alpha stable filters. Narayanan, S.J., Soundrapandiyan, R., Perumal, B. Comput. Comput. We have used RMSprop optimizer for weight updates, cross entropy loss function and selected learning rate as 0.0001. \(Fit_i\) denotes a fitness function value. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. 51, 810820 (2011). (22) can be written as follows: By taking into account the early mentioned relation in Eq. A NOVEL COMPARATIVE STUDY FOR AUTOMATIC THREE-CLASS AND FOUR-CLASS COVID-19 CLASSIFICATION ON X-RAY IMAGES USING DEEP LEARNING: Authors: Yaar, H. Ceylan, M. Keywords: Convolutional neural networks Covid-19 Deep learning Densenet201 Inceptionv3 Local binary pattern Local entropy X-ray chest classification Xception: Issue Date: 2022: Publisher: Then the best solutions are reached which determine the optimal/relevant features that should be used to address the desired output via several performance measures. <span> <h5>Background</h5> <p>The COVID19 pandemic has precipitated global apprehensions about increased fatalities and raised concerns about gaps in healthcare . For the exploration stage, the weibull distribution has been applied rather than Brownian to bost the performance of the predator in stage 2 and the prey velocity in stage 1 based on the following formula: Where k, and \(\zeta\) are the scale and shape parameters. Eng. Kong, Y., Deng, Y. Interobserver and Intraobserver Variability in the CT Assessment of With the help of numerous algorithms in AI, modern COVID-19 cases can be detected and managed in a classified framework. Google Research, https://research.googleblog.com/2017/11/automl-for-large-scaleimage.html, Blog (2017). The GL in the discrete-time form can be modeled as below: where T is the sampling period, and m is the length of the memory terms (memory window). Correspondence to New machine learning method for image-based diagnosis of COVID-19 - PLOS 2 (right). They shared some parameters, such as the total number of iterations and the number of agents which were set to 20 and 15, respectively. Isolation and characterization of a bat sars-like coronavirus that uses the ace2 receptor. org (2015). In this paper, a new ML-method proposed to classify the chest x-ray images into two classes, COVID-19 patient or non-COVID-19 person. Inception architecture is described in Fig. In14, the authors proposed an FS method based on a convolutional neural network (CNN) to detect pneumonia from lung X-ray images. Eng. According to the promising results of the proposed model, that combines CNN as a feature extractor and FO-MPA as a feature selector could be useful and might be successful in being applied in other image classification tasks. Research and application of fine-grained image classification based on Improving the ranking quality of medical image retrieval using a genetic feature selection method. Although outbreaks of SARS and MERS had confirmed human to human transmission3, they had not the same spread speed and infection power of the new coronavirus (COVID-19). Tree based classifier are the most popular method to calculate feature importance to improve the classification since they have high accuracy, robustness, and simple38. [PDF] Detection and Severity Classification of COVID-19 in CT Images arXiv preprint arXiv:2003.13145 (2020). Future Gener. Initialization phase: this phase devotes for providing a random set of solutions for both the prey and predator via the following formulas: where the Lower and Upper are the lower and upper boundaries in the search space, \(rand_1\) is a random vector \(\in\) the interval of (0,1). Medical imaging techniques are very important for diagnosing diseases. The test accuracy obtained for the model was 98%. COVID-19 image classification using deep learning: Advances, challenges and opportunities COVID-19 image classification using deep learning: Advances, challenges and opportunities Comput Biol Med. Li, S., Chen, H., Wang, M., Heidari, A. Continuing on my commitment to share small but interesting things in Google Cloud, this time I created a model for a The MCA-based model is used to process decomposed images for further classification with efficient storage. }\delta (1-\delta )(2-\delta ) U_{i}(t-2)\\&\quad + \frac{1}{4! The proposed IMF approach successfully achieves two important targets, selecting small feature numbers with high accuracy. (14)-(15) are implemented in the first half of the agents that represent the exploitation. Lett. They employed partial differential equations for extracting texture features of medical images. The variants of concern are Alpha, Beta, Gamma, and than the COVID-19 images. In this work, the MPA is enhanced by fractional calculus memory feature, as a result, Fractional-order Marine Predators Algorithm (FO-MPA) is introduced. Introduction Syst. In this paper, filters of size 2, besides a stride of 2 and \(2 \times 2\) as Max pool, were adopted. For general case based on the FC definition, the Eq. PVT-COV19D: COVID-19 Detection Through Medical Image Classification Fractional-order calculus (FC) gains the interest of many researchers in different fields not only in the modeling sectors but also in developing the optimization algorithms. To address this challenge, this paper proposes a two-path semi- supervised deep learning model, ssResNet, based on Residual Neural Network (ResNet) for COVID-19 image classification, where two paths refer to a supervised path and an unsupervised path, respectively. Therefore, several pre-trained models have won many international image classification competitions such as VGGNet24, Resnet25, Nasnet26, Mobilenet27, Inception28 and Xception29. Adv. For each decision tree, node importance is calculated using Gini importance, Eq. In Table4, for Dataset 1, the proposed FO-MPA approach achieved the highest accuracy in the best and mean measures, as it reached 98.7%, and 97.2% of correctly classified samples, respectively. In this paper, different Conv. Pool layers are used mainly to reduce the inputs size, which accelerates the computation as well. The results showed that the proposed approach showed better performances in both classification accuracy and the number of extracted features that positively affect resource consumption and storage efficiency. & Pouladian, M. Feature selection for contour-based tuberculosis detection from chest x-ray images. PubMed Central COVID-19 image classification using deep features and fractional-order marine predators algorithm. In our experiment, we randomly split the data into 70%, 10%, and 20% for training, validation, and testing sets, respectively. I. S. of Medical Radiology. As seen in Fig. In the meantime, to ensure continued support, we are displaying the site without styles Accordingly, the FC is an efficient tool for enhancing the performance of the meta-heuristic algorithms by considering the memory perspective during updating the solutions. In general, MPA is a meta-heuristic technique that simulates the behavior of the prey and predator in nature37. Ge, X.-Y. A Novel Comparative Study for Automatic Three-class and Four-class Etymology. The symbol \(R_B\) refers to Brownian motion. You are using a browser version with limited support for CSS. Faramarzi et al.37 divided the agents for two halves and formulated Eqs. Moreover, other COVID-19 positive images were added by the Italian Society of Medical and Interventional Radiology (SIRM) COVID-19 Database45.
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